fret

Burst analysis software for smFRET. **Moved to OpenSMFS organization**

Python package for site-directed spin labeling of proteins

A simulator for single molecule FRET experiments of freely diffusing particles.

FretBurstStudio is a GUI software tool for analyzing single-molecule FRET (Förster Resonance Energy Transfer) data

Nucleic acid fluorescence labeling for all-atom MD simulations

Batch processing of PicoQuant PTU files into multicolor fluorescent images. Application is meant for fast screening of images and Z-stacks during experiments. 2D_PicoQuant_ImageScreen processes intensity only, lifetime is not used.

Differentiable FRET distance distribution modeling in JAX

Single-molecule fluorescence trace extraction and analysis

Determine transition kinetics from single molecule FRET experiments

Tether - provenance-first smFRET analysis suite (movie -> trace -> corrected FRET -> idealized states). GPL-3.0.

本软件集成了FRET分子信息与细胞表型信息的交叉分析流程，从图像预处理、分割、特征提取、特征分析、特征融合，到最后的药物药效评价，形成一整个分析链路，提供一种分析框架，提供了完善FRET-HCS的分析软件

Genetic algorithm for FRETish requirements

A sophisticated all-in-one FRET Tool developed by SONLab Team

Modular Python analysis of two-channel FRET microscopy time-series.

Unet, NestedUnet, U2Net, included for Huvec cell segmentation (16bit image)

Desktop tool for fluorescence plate reader analysis — DNA strand displacement, FRET, kinetic modelling | Python/PyQt5