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@loculus-project

Loculus

Open-source database software for genomic data, dedicated to empowering better sequence storage, sharing, and access.

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  1. loculus loculus Public

    An open-source software package to power microbial genomic databases

    TypeScript 76 13

  2. ena-submission ena-submission Public

    This is a copy of https://github.com/pathoplexus/ena-submission for testing in Loculus

    1

  3. keycloak-orcid keycloak-orcid Public

    Forked from eosc-kc/keycloak-orcid

    Extension for configuring ORCID as Social Identity Provider in Keycloak

    Java

  4. nextclade-sort-minimizers nextclade-sort-minimizers Public

    Small repo to generate and store minimizer JSONs for nextclade sort with customizable specificity

    Python

  5. diamond-reference-databases diamond-reference-databases Public

    Small repo to generate and store DIAMOND formatted (.dmnd file extension) reference databases for diamond blastx sort with customizable specificity

    Python

  6. agent_skills agent_skills Public

    1

Repositories

Showing 8 of 8 repositories
  • loculus Public

    An open-source software package to power microbial genomic databases

    loculus-project/loculus's past year of commit activity
    TypeScript 76 AGPL-3.0 13 810 271 Updated Nov 12, 2026
  • ena-submission Public

    This is a copy of https://github.com/pathoplexus/ena-submission for testing in Loculus

    loculus-project/ena-submission's past year of commit activity
    1 0 0 0 Updated Oct 27, 2026
  • agent_store Public

    For agents to store e.g. screenshot images in

    loculus-project/agent_store's past year of commit activity
    Python 0 0 0 0 Updated Oct 27, 2026
  • readtools Public Forked from enasequence/readtools

    ENA webin reads validation API and CLI

    loculus-project/readtools's past year of commit activity
    Java 0 Apache-2.0 4 0 3 Updated Jul 16, 2026
  • nextclade-sort-minimizers Public

    Small repo to generate and store minimizer JSONs for nextclade sort with customizable specificity

    loculus-project/nextclade-sort-minimizers's past year of commit activity
    Python 0 0 0 0 Updated Mar 27, 2026
  • diamond-reference-databases Public

    Small repo to generate and store DIAMOND formatted (.dmnd file extension) reference databases for diamond blastx sort with customizable specificity

    loculus-project/diamond-reference-databases's past year of commit activity
    Python 0 0 0 0 Updated Feb 26, 2026
  • agent_skills Public
    loculus-project/agent_skills's past year of commit activity
    0 1 0 1 Updated Feb 13, 2026
  • keycloak-orcid Public Forked from eosc-kc/keycloak-orcid

    Extension for configuring ORCID as Social Identity Provider in Keycloak

    loculus-project/keycloak-orcid's past year of commit activity
    Java 0 7 0 0 Updated Dec 9, 2024

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